Singh VK, Garg R, Jain M (2013). A global view of transcriptome dynamics during flower development in chickpea by deep sequencing. Plant Biotechnology Journal, 11(6): 691-701

Agarwal G, Jhanwar S, Priya P, Singh VK, Saxena MS, Parida SK, Garg R, Tyagi AK, Jain M (2012). Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provided a rich resource for development of functional markers. PLoS ONE, 7: e52443

Jhanwar S, Priya P, Garg R, Parida SK, Tyagi AK, Jain M (2012). Transcriptome sequencing of wild chickpea as a rich resource for marker development. Plant Biotechnology Journal, 10: 690-702

Patel RK, Jain M (2012). NGS QC Toolkit: A toolkit for quality control of next generation sequencing data. PLoS ONE, 7 (2): e30619

Jain M (2011). Next generation sequencing technologies for gene expression profiling in plants. Briefings in Functional Genomics, 2: 63-70

Jain M (2011). A next generation approach to the characterization of a non-model plant transcriptome. Current Science, 101: 1435-1439

Garg R, Jain M (2011). Pyrosequencing data reveals tissue-specific expression of lineage-specific transcripts in chickpea. Plant Signaling & Behavior, 6: 1868-1870

Garg R, Patel RK, Jhanwar S, Priya P, Bhattacharjee A, Yadav G, Bhatia S, Chattopadhyay D, Tyagi AK, Jain M (2011). Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development. Plant Physiol., 156: 1661-1678

Garg R, Patel RK, Tyagi AK, Jain M (2011). De novo assembly of chickpea transcriptome using short reads for gene discovery and marker identification. DNA Res., 18 (1): 53-63

Garg R, Sahoo A, Tyagi AK, Jain M (2010). Validation of internal control genes for quantitative gene expression studies in chickpea (Cicer arietinum L.). Biochem. Biophys. Res. Commun., 396: 283-288